Welcome to the Cortecon

This resource provides a number of different views into expression data captured in the developing cortex.

Current Data Set: CORTECON: A Temporal Transcriptome Analysis of In Vitro Human Cerebral Cortex Development From Human Embryonic Stem Cells. van de Leemput et. al, Neuron (2014), view the paper online at Neuron
Data Downloads (for use in R): Minimal R Session(18Mb), Full R Session(149Mb), Sample R Interaction Code(49Kb), R session test case(39Mb), Mouse cortex data(6Mb).
Data Download (from the Gene Expression Omnibus): Series GSE56796.
Neural Differentiation
Cortical Specification
Deep Layers
Upper Layers

View By Gene

Enter text to find a gene

Gene Name:

Browse By Disease

Use keywords to search the Cortecon repository for disease enrichment.

Disease Keyword:

View By KEGG Pathway

Enter text to search the cortecon for enriched pathways.

Pathway Keywords:

View By GO Ontology

Enter keywords to search the cortecon for enriched ontologies.

Ontology Keywords: